资源类型:
期刊
WOS体系:
Article
Pubmed体系:
Journal Article
收录情况:
◇ SCIE
文章类型:
论著
机构:
[1]Beijing Hospital of Traditional Chinese Medicine, Capital Medical University, Beijing, China.
[2]Xuanwu Hospital, Capital Medical University, Beijing, China.
首都医科大学宣武医院
ISSN:
1664-8021
摘要:
Background: With a high incidence and dismal survival rate, hepatocellular carcinoma (HCC) tops the list of the world's most frequent malignant tumors. Immunotherapy is a new approach to cancer treatment, and its effect on prolonging overall survival (OS) varies from patient to patient. For a more effective prognosis and treatment of HCC, we are committed to identifying immune infiltration-related long non-coding RNAs (IIRLs) with prognostic value in hepatocellular carcinoma. Methods: In our study, we calculated immune scores of 369 hepatocellular carcinoma samples from the Cancer Genome Atlas (TCGA) database by using an estimation algorithm, and obtained long non-coding RNAs (lncRNAs) associated with immune infiltration by using Weighted Gene Co-expression Network analysis (WGCNA). For training cohort, univariate Cox, least absolute shrinkage and selection operator (Lasso) and multivariate Cox regression analysis were used to determine prognostic IIRLs, we established a prognostic IIRLs signature. By testing cohort and entire cohort, we confirmed that the signature is practical. The prognosis of people with different clinicopathological stages and risk scores were predicted by the nomogram we constructed. In addition, Immune cell infiltration analysis and prediction of therapeutic drugs were performed. Results: 93 IIRLs were obtained by WGCNA. Furthermore, the prognostic value of these IIRLs were evaluated by using univariate Cox, Lasso and multivariate Cox analysis. Four IIRLs were used to create a signature with a prognosis. Time-related receiver operating characteristic (ROC) curve revealed that this model had an acceptable prognostic value for HCC patients. By using univariate and multivariate Cox regression analysis, this risk score has been shown to be an independent prognostic factor for HCC. The nomogram we made showed good predictions. Except for that, the treatment with immune checkpoint inhibitors (ICI) was likely to be more effective for low-risk patients. Conclusion: Based on four IIRLs, a prognostic signature was created in this research showed good accuracy in predicting OS. This study also provided valuable references for Immunotherapy of hepatocellular carcinoma.Copyright © 2022 Li, Xu, Yang, Wu, Zhang and Wang.
基金:
This work was supported by the National Nature Science
Foundation of China (8177150984).
被引次数:
1
WOS:
WOS:000902148400001
PubmedID:
36568382
中科院(CAS)分区:
出版当年[2021]版:
大类
|
3 区
生物学
小类
|
3 区
遗传学
最新[2023]版:
大类
|
3 区
生物学
小类
|
3 区
遗传学
JCR分区:
出版当年[2020]版:
Q2
GENETICS & HEREDITY
最新[2023]版:
Q2
GENETICS & HEREDITY
影响因子:
2.8
最新[2023版]
3.3
最新五年平均
4.599
出版当年[2020版]
4.888
出版当年五年平均
3.26
出版前一年[2019版]
4.772
出版后一年[2021版]
第一作者:
Li Gen
第一作者机构:
[1]Beijing Hospital of Traditional Chinese Medicine, Capital Medical University, Beijing, China.
通讯作者:
Wang Hongbing
推荐引用方式(GB/T 7714):
Li Gen,Xu Shaodian,Yang Shuai,et al.An immune infiltration-related long non-coding RNAs signature predicts prognosis for hepatocellular carcinoma[J].FRONTIERS IN GENETICS.2022,13:doi:10.3389/fgene.2022.1029576.
APA:
Li Gen,Xu Shaodian,Yang Shuai,Wu Cong,Zhang Liangliang&Wang Hongbing.(2022).An immune infiltration-related long non-coding RNAs signature predicts prognosis for hepatocellular carcinoma.FRONTIERS IN GENETICS,13,
MLA:
Li Gen,et al."An immune infiltration-related long non-coding RNAs signature predicts prognosis for hepatocellular carcinoma".FRONTIERS IN GENETICS 13.(2022)