Segmentation of infarcts at hyperacute stage is challenging as they exhibit substantial variability which may even be hard for experts to delineate manually. In this paper, a sparse representation based classification method is explored. For each patient, four volumetric data items including three volumes of diffusion weighted imaging and a computed asymmetry map are employed to extract patch features which are then fed to dictionary learning and classification based on sparse representation. Elastic net is adopted to replace the traditional L-0-norm/L-1-norm constraints on sparse representation to stabilize sparse code. To decrease computation cost and to reduce false positives, regions-of-interest are determined to confine candidate infarct voxels. The proposed method has been validated on 98 consecutive patients recruited within 6 hours from onset. It is shown that the proposed method could handle well infarcts with intensity variability and ill-defined edges to yield significantly higher Dice coefficient (0.755 +/- 0.118) than the other two methods and their enhanced versions by confining their segmentations within the regions-of-interest (average Dice coefficient less than 0.610). The proposed method could provide a potential tool to quantify infarcts from diffusion weighted imaging at hyperacute stage with accuracy and speed to assist the decision making especially for thrombolytic therapy.
基金:
National Program on Key Basic Research ProjectNational Basic Research Program of China [2013CB733800, 2013CB733803]; National Natural Science FoundationNational Natural Science Foundation of China [61671440]; National Science and Technology Pillar Program during the Twelfth Five-Year Plan Period [2011BAI08B09]; Shenzhen Key Technical Development Grant [CXZZ20140610151856719]; Shenzhen Basic Research Grant [JCYJ20140414170821262]
Zhang Xiaodong,Jing Shasha,Gao Peiyi,et al.Segmentation of Hyperacute Cerebral Infarcts Based on Sparse Representation of Diffusion Weighted Imaging[J].COMPUTATIONAL AND MATHEMATICAL METHODS IN MEDICINE.2016,2016:-.doi:10.1155/2016/2581676.
APA:
Zhang, Xiaodong,Jing, Shasha,Gao, Peiyi,Xue, Jing,Su, Lu...&Hu, Qingmao.(2016).Segmentation of Hyperacute Cerebral Infarcts Based on Sparse Representation of Diffusion Weighted Imaging.COMPUTATIONAL AND MATHEMATICAL METHODS IN MEDICINE,2016,
MLA:
Zhang, Xiaodong,et al."Segmentation of Hyperacute Cerebral Infarcts Based on Sparse Representation of Diffusion Weighted Imaging".COMPUTATIONAL AND MATHEMATICAL METHODS IN MEDICINE 2016.(2016):-