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Long noncoding RNA expression profile of mouse cementoblasts under compressive force

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机构: [a]Department of Orthodontics, Peking University School and Hospital of Stomatology, Beijing, China. [b]Department of Orthodontics, Peking University School and Hospital of Stomatology, Beijing, China. [c]Department of Stomatology, Beijing Children’s Hospital, Capital Medical University, National Center for Children’s Health, Beijing, China. [d]Central Laboratory, Peking University School and Hospital of Stomatology, Beijing, China. [e]Department of Orthodontics, Peking University School and Hospital of Stomatology, Beijing, China. [f]Department of Orthodontics, Peking University School and Hospital of Stomatology, Beijing, China.
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关键词: Long noncoding RNA Cementoblasts Compressive stress RNA-seq Root resorption

摘要:
Objectives: To investigate the long noncoding RNA (lncRNA) expression profile of cementoblasts under compressive force. Materials and Methods: Mouse cementoblasts were exposed to compression (1.5 g/cm(2)) for 8 hours. RNA sequencing (RNA-seq) was performed to compare the transcriptomes of the compressed and control cells. Quantitative real-time polymerase chain reaction (qRT-PCR) was used to validate five of the differentially expressed lncRNAs of interest. Gene Ontology (GO) functional annotation and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses were also performed. Results: A total of 70 lncRNAs and 521 mRNAs were differentially regulated in cementoblasts subjected to compressive loading. Among the differentially expressed lncRNAs, 57 were upregulated and 13 downregulated. The expression levels of the five selected lncRNAs (Prkcz2, Hklos, Trp53cor1, Gdap10, and Ak312-ps) were validated by qRT-PCR and consistent with the RNA-seq results. GO functional annotation demonstrated upregulation of genes associated with cellular response to hypoxia and apoptotic processes during compressive loading. KEGG analysis identified the crucial pathways involving the hypoxia-inducing factor-1 alpha, forkhead box O, and mammalian target of rapamycin signaling pathways. Conclusions: Mechanical compression changes the lncRNA expression profile of cementoblasts, providing important references for further investigation into the role and regulation of lncRNAs in compressed cementoblasts and root resorption during orthodontic treatment.

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出版当年[2018]版:
大类 | 4 区 医学
小类 | 3 区 牙科与口腔外科
最新[2023]版:
大类 | 2 区 医学
小类 | 2 区 牙科与口腔外科
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出版当年[2017]版:
Q3 DENTISTRY, ORAL SURGERY & MEDICINE
最新[2023]版:
Q1 DENTISTRY, ORAL SURGERY & MEDICINE

影响因子: 最新[2023版] 最新五年平均 出版当年[2017版] 出版当年五年平均 出版前一年[2016版] 出版后一年[2018版]

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第一作者机构: [a]Department of Orthodontics, Peking University School and Hospital of Stomatology, Beijing, China.
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通讯作者:
通讯机构: [f]Department of Orthodontics, Peking University School and Hospital of Stomatology, Beijing, China. [*1]Department of Orthodontics, Peking University School and Hospital of Stomatology, 22 Zhongguancun South Avenue, Haidian District, Beijing 100081, China
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