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miR-17-5p-CXCL14 axis related transcriptome profile and clinical outcome in diffuse gliomas

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机构: [a]Department of Neurosurgery, The First Affiliated Hospital of Nanjing Medical University, Nanjing, PR China [b]Department of Neurology, Brigham and Women’s Hospital and Harvard Medical School, Boston, MA, 02115, USA [c]Department of Neurosurgery, Beijing Tiantan Hospital, Capital Medical University, Beijing China
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关键词: Glioma immune response CXCL14 miR-17-5p

摘要:
GBM tissues are comprised of not only tumor cells but also tumor-associated nontumor cells, such as stromal cells and immune cells, which dilute the purity of glioma cells and function in glioma biology. However, the roles of miRNAs in modulating glioma purity are not clari?ed. In total, 838 glioma samples with transcriptome data, including 537 RNAseq data from TCGA project and 301 microarray data from Chinese Glioma Genome Atlas (CGGA project), were recruited into our investigation. Tumor purity, molecular subtypes and IDH status were also available. R language was employed as the main tool for statistical analysis and graphical work. Screening miRNA profiling and paired TCGA samples' transcriptome data demonstrates that miR-17-5p expression harbors the most significant positive correlation with glioma purity among all miRNAs. CXCL14 shows robust negative correlation with miR-17-5p expression in TCGA and CGGA dataset. miR-17-5p directly targets CXCL14 and functions as a tumor-suppressor of GBM. CXCL14 showed lower expression in proneural subtype and may contribute as a potential marker for proneural subtype in glioma. Genes markedly correlated with CXCL14 are involved in essential functions associated with anti-tumor immune process. CXCL14 has a strong correlation with immune(T cells, Monocytic lineage and Neutrophils) and Fibroblasts within glioma environment. miR-17-5p and CXCL14 exhibited predictive values for high-grade glioma(HGG) patients: Higher miR-17-5p indicated significantly longer survival while lower CXCL14 indicated longer survival. Our results highlight the importance of the miR-17-5p-CXCL14 axis in regulating key steps of anti-tumor immune process and may serve as potential targets of immune treatments for gliomas.

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出版当年[2017]版:
大类 | 1 区 医学
小类 | 2 区 免疫学 2 区 肿瘤学
最新[2023]版:
大类 | 2 区 医学
小类 | 2 区 免疫学 2 区 肿瘤学
第一作者:
第一作者机构: [a]Department of Neurosurgery, The First Affiliated Hospital of Nanjing Medical University, Nanjing, PR China [b]Department of Neurology, Brigham and Women’s Hospital and Harvard Medical School, Boston, MA, 02115, USA
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通讯机构: [a]Department of Neurosurgery, The First Affiliated Hospital of Nanjing Medical University, Nanjing, PR China [*1]Department of Neurosurgery, The First Affiliated Hospital of Nanjing Medical University, No.300, Guangzhou Road, Gulou District, Nanjing, 210029, PR China [*2]Department of Neurosurgery, The First Affiliated Hospital of Nanjing Medical University, No.300, Guangzhou Road, Gulou District, Nanjing, 210029, PR China
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