Non-invasive genotype prediction of chromosome 1p/19q co-deletion by development and validation of an MRI-based radiomics signature in lower-grade gliomas
机构:[1]School of Life Science and Technology, Xidian University, Xi’an 710126, China[2]Key Laboratory of Molecular Imaging, Institute of Automation, Chinese Academy of Sciences, Beijing 100190, China[3]Department of Neurosurgery, Beijing Tiantan Hospital, Capital Medical University, Beijing 100050, China重点科室诊疗科室神经外科神经外科首都医科大学附属天坛医院[4]Beijing Key Laboratory of Molecular Imaging, Beijing 100190, China[5]Stanford Center for Biomedical Informatics Research, Stanford University, Palo Alto, CA, USA[6]Department of Neuroradiology, Beijing Neurosurgical Institute, Capital Medical University, No. 6 Tiantanxili, Dongcheng District, Beijing 100050, China重点科室医技科室研究所放射科放射科北京市神经外科研究所首都医科大学附属天坛医院[7]The State Key Laboratory of Management and Control for Complex Systems, Institute of Automation, Chinese Academy of Sciences, Beijing 100190, China[8]University of Chinese Academy of Sciences, Beijing 100049, China[9]China National Clinical Research Center for Neurological Diseases, Beijing 100050, China
PurposeTo perform radiomics analysis for non-invasively predicting chromosome 1p/19q co-deletion in World Health Organization grade II and III (lower-grade) gliomas.MethodsThis retrospective study included 277 patients histopathologically diagnosed with lower-grade glioma. Clinical parameters were recorded for each patient. We performed a radiomics analysis by extracting 647 MRI-based features and applied the random forest algorithm to generate a radiomics signature for predicting 1p/19q co-deletion in the training cohort (n=184). The clinical model consisted of pertinent clinical factors, and was built using a logistic regression algorithm. A combined model, incorporating both the radiomics signature and related clinical factors, was also constructed. The receiver operating characteristics curve was used to evaluate the predictive performance. We further validated the predictability of the three developed models using a time-independent validation cohort (n=93).ResultsThe radiomics signature was constructed as an independent predictor for differentiating 1p/19q co-deletion genotypes, which demonstrated superior performance on both the training and validation cohorts with areas under curve (AUCs) of 0.887 and 0.760, respectively. These results outperformed the clinical model (AUCs of 0.580 and 0.627 on training and validation cohorts). The AUCs of the combined model were 0.885 and 0.753 on training and validation cohorts, respectively, which indicated that clinical factors did not present additional improvement for the prediction.ConclusionOur study highlighted that an MRI-based radiomics signature can effectively identify the 1p/19q co-deletion in histopathologically diagnosed lower-grade gliomas, thereby offering the potential to facilitate non-invasive molecular subtype prediction of gliomas.
基金:
National Natural Science Foundation of ChinaNational Natural Science Foundation of China [81227901, 81527805, 81501616, 81771924]; National Key Research and Development Program of China [2106YFC0103702, 2017YFA0205200]; National Institute of Biomedical Imaging And Bioengineering of the National Institutes of HealthUnited States Department of Health & Human ServicesNational Institutes of Health (NIH) - USANIH National Institute of Biomedical Imaging & Bioengineering (NIBIB) [R01EB020527]
第一作者机构:[1]School of Life Science and Technology, Xidian University, Xi’an 710126, China[2]Key Laboratory of Molecular Imaging, Institute of Automation, Chinese Academy of Sciences, Beijing 100190, China[4]Beijing Key Laboratory of Molecular Imaging, Beijing 100190, China
共同第一作者:
通讯作者:
通讯机构:[2]Key Laboratory of Molecular Imaging, Institute of Automation, Chinese Academy of Sciences, Beijing 100190, China[3]Department of Neurosurgery, Beijing Tiantan Hospital, Capital Medical University, Beijing 100050, China[4]Beijing Key Laboratory of Molecular Imaging, Beijing 100190, China[7]The State Key Laboratory of Management and Control for Complex Systems, Institute of Automation, Chinese Academy of Sciences, Beijing 100190, China[8]University of Chinese Academy of Sciences, Beijing 100049, China[9]China National Clinical Research Center for Neurological Diseases, Beijing 100050, China
推荐引用方式(GB/T 7714):
Han Yuqi,Xie Zhen,Zang Yali,et al.Non-invasive genotype prediction of chromosome 1p/19q co-deletion by development and validation of an MRI-based radiomics signature in lower-grade gliomas[J].JOURNAL OF NEURO-ONCOLOGY.2018,140(2):297-306.doi:10.1007/s11060-018-2953-y.
APA:
Han, Yuqi,Xie, Zhen,Zang, Yali,Zhang, Shuaitong,Gu, Dongsheng...&Zhou, Dabiao.(2018).Non-invasive genotype prediction of chromosome 1p/19q co-deletion by development and validation of an MRI-based radiomics signature in lower-grade gliomas.JOURNAL OF NEURO-ONCOLOGY,140,(2)
MLA:
Han, Yuqi,et al."Non-invasive genotype prediction of chromosome 1p/19q co-deletion by development and validation of an MRI-based radiomics signature in lower-grade gliomas".JOURNAL OF NEURO-ONCOLOGY 140..2(2018):297-306