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Genome-wide association study provides insights into the genetic basis of Lewy body dementia

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机构: [1]Capital Med Univ, Natl Engn Ctr Internet Med Diag & Treatment Techno, Collaborat Innovat Ctr Brain Disorders,Beijing Key, Xuanwu Hosp,Beijing Inst Brain Disorders,Minist Sc, Beijing 100069, Peoples R China [2]Shandong Univ, Jinan Cent Hosp, Jinan, Shandong, Peoples R China [3]Wannan Med Coll, Sch Publ Hlth, Dept Epidemiol & Biostat, 22 Wenchang Rd, Wuhu 241002, Anhui, Peoples R China [4]Shengli Oilfield Cent Hosp, Ctr Collaborat Innovat Ctr Brain Disorders, Dongying Branch, 31 Jinan Rd, Dongying 257034, Shandong, Peoples R China [5]Shandong Hlth & Wellness Ind Teaching & Res Allian, Taian Silver Hair Econ Res Inst, Taian Smart Hlth Technol Innovat Ctr, Taishan Vocat Coll Nursing,Off Acad Res, Tai An 271000, Shandong, Peoples R China [6]Chengdu Univ Tradit Chinese Med, Affiliated Peoples Hosp 5, Chengdu Peoples Hosp 5,Clin Med Coll 2, Clin Med Translat Res Inst,Geriatr Dis Inst Chengd, 33 Ma Shi St, Chengdu 611137, Sichuan, Peoples R China [7]Tongren Peoples Hosp, Dept Neurol & Neurosurg, Tongren 554300, Guizhou, Peoples R China
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Lewy body dementia (LBD) is the second most prevalent dementia, however most genetic risk remains uncharacterized. Here, we performed the largest LBD genome-wide association study (GWAS) meta-analysis including 4252 LBD cases and 189,290 controls. We confirmed four previously known risk loci APOE, GBA, BIN1, and SNCA-AS1, and highlighted a novel locus SYT16. We further integrated LBD GWAS with multi-omics datasets, and identified 85 LBD risk genes that were enriched in eight functional clusters including 51 statistically significant pathways (e.g., SYT16 was enriched in the phospholipid binding pathway). Drug-gene interaction analysis highlighted the potential clinical utility of these LBD risk genes, especially APOE, GBA, BIN1, SNCA, SYT16, and INO80E. Differential gene expression analysis further highlighted the significant dysregulation of these genes in LBD brain tissues (e.g., hippocampus) and brain cells (e.g., excitatory neurons). Using gene prioritization, we identified 20 candidate causal genes including five novel risk genes, one within the risk locus SYT16 and four outside known risk loci (INO80E, DOC2A, ASPHD1, and RITA1). Tissue and cell-type specific enrichment analyses showed significant enrichment in brain tissues (e.g., dorsolateral prefrontal cortex) and brain cells (e.g., astrocytes). Mendelian randomization analysis provided evidence for the causal effects of LBD on reduction in brain structures (e.g., hippocampus) and cognitive performance. Finally, genetic correlation analysis showed that LBD was significantly positively associated with Alzheimer's disease and Parkinson's disease. In summary, our findings provide insights into the genetic basis of LBD and identify novel targets for the molecular mechanisms underlying LBD.

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大类 | 1 区 医学
小类 | 1 区 生化与分子生物学 1 区 神经科学 1 区 精神病学
最新[2025]版:
大类 | 1 区 医学
小类 | 1 区 生化与分子生物学 1 区 神经科学 1 区 精神病学
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出版当年[2023]版:
Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Q1 NEUROSCIENCES Q1 PSYCHIATRY
最新[2024]版:
Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Q1 NEUROSCIENCES Q1 PSYCHIATRY

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第一作者机构: [1]Capital Med Univ, Natl Engn Ctr Internet Med Diag & Treatment Techno, Collaborat Innovat Ctr Brain Disorders,Beijing Key, Xuanwu Hosp,Beijing Inst Brain Disorders,Minist Sc, Beijing 100069, Peoples R China
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通讯机构: [1]Capital Med Univ, Natl Engn Ctr Internet Med Diag & Treatment Techno, Collaborat Innovat Ctr Brain Disorders,Beijing Key, Xuanwu Hosp,Beijing Inst Brain Disorders,Minist Sc, Beijing 100069, Peoples R China [3]Wannan Med Coll, Sch Publ Hlth, Dept Epidemiol & Biostat, 22 Wenchang Rd, Wuhu 241002, Anhui, Peoples R China [4]Shengli Oilfield Cent Hosp, Ctr Collaborat Innovat Ctr Brain Disorders, Dongying Branch, 31 Jinan Rd, Dongying 257034, Shandong, Peoples R China [6]Chengdu Univ Tradit Chinese Med, Affiliated Peoples Hosp 5, Chengdu Peoples Hosp 5,Clin Med Coll 2, Clin Med Translat Res Inst,Geriatr Dis Inst Chengd, 33 Ma Shi St, Chengdu 611137, Sichuan, Peoples R China [7]Tongren Peoples Hosp, Dept Neurol & Neurosurg, Tongren 554300, Guizhou, Peoples R China
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