Treatment for drug-resistant epilepsy in poor candidates for resection surgeries remains challenging. The prevailing deep brain stimulation of subcortical nuclei is effective but exhibits heterogeneous efficacy and unpredictable side effects. Therefore, the investigation of novel DBS targets holds paramount importance. Here, we focused on the unique structure known as the extreme capsule (EC), being "butterfly"-like structure passing through the uncinate fasciculus, the inferior fronto-occipital fasciculus and the convergence of the short association fibers connecting to insula. We investigated the modulation effect of extreme capsule stimulation in 11 drug-resistant epilepsy patients (mean age:28 years; male: female = 8:3) who underwent stereoelectroencephalography as part of presurgical evaluation. One electrode was extended to EC ipsilateral to the presumed seizure onset zone. Structural connectivity to the EC derived from structural human connectome data (n=1065) were estimated to compare with the effective connectivity to the EC using single-pulse stimulation at 1 Hz during the resting state. To assess the modulation effect of EC stimulation, we employed stepwise incremental stimulation ranging from 5 Hz to 145 Hz in a cyclical pattern. We evaluated how neural activity across distributed cortical areas synchronized with EC stimulation frequencies, and the changes in interictal epileptiform discharges and ripples during the stimulation period compared to the baseline. Moreover, 1 Hz burst stimulation mode was applied to further refine the stimulation protocol. We showed the EC effective connectivity aligned well with the EC structural network. We further observed that the synchronized and desynchronized modulation effect of EC stimulation is frequency specific across all the patients. Most importantly, we found that the modulation effect of EC stimulation is constrained by its structural connectivity. Specifically, high-frequency stimulation of EC significantly suppressed the epileptic discharges in the ipsilateral orbitofrontal lobe, occipital gyrus, inferior frontal gyrus, insula and temporal pole, which were inside the EC structural network rather than outside it (P<0.001). Of note, EC 1 Hz burst stimulation demonstrated a comparable inhibitory efficacy to conventional high-frequency stimulation (ANOVA, F=5.331, P<0.001). This proof-of-concept study demonstrates that the EC is a promising deep brain stimulation target for treating substantial focal epilepsy with seizure originating from EC structurally connected cortex. It further demonstrates the feasibility of transforming knowledge of white matter node stimulation for seizures originating from its physically connected cortex and offers a promising therapeutic approach using alternative stimulation methods.© The Author(s) 2025. Published by Oxford University Press on behalf of the Guarantors of Brain. All rights reserved. For commercial re-use, please contact reprints@oup.com for reprints and translation rights for reprints. All other permissions can be obtained through our RightsLink service via the Permissions link on the article page on our site—for further information please contact journals.permissions@oup.com.