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Characterization and Expression Patterns of Auxin Response Factors in Wheat

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机构: [1]Shanxi Key Laboratory of Crop Genetics and Molecular Improvement, Key Laboratory of Crop Gene Resources and Germplasm Enhancement on Loess Plateau of the Ministry of Agriculture, Institute of Crop Science, Shanxi Academy of Agricultural Sciences, Taiyuan, China, [2]Center for Genomics and Biotechnology, Haixia Institute of Science and Technology, Fujian Agriculture and Forestry University, Fuzhou, China, [3]Beijing Institute of Heart Lung and Blood Vessel Diseases, Beijing Anzhen Hospital Affiliated with the Capital Medical University, Beijing, China, [4]Department of Plant Protection, College of Agriculture, Shanxi Agricultural University, Taigu, China
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关键词: genomewide ARFs alternative splicing expression pattern PAML transgenic functional verification

摘要:
Auxin response factors (ARFs) are important transcription factors involved in both the auxin signaling pathway and the regulatory development of various plant organs. In this study, 23 TaARF members encoded by a total of 68 homeoalleles were isolated from 18 wheat chromosomes (excluding chromosome 4). The TaARFs, including their conserved domains, exon/intron structures, related microRNAs, and alternative splicing (AS) variants, were then characterized. Phylogenetic analysis revealed that members of the TaARF family share close homology with ARFs in other grass species. qRT-PCR analyses revealed that 20 TaARF members were expressed in different organs and tissues and that the expression of some members significantly differed in the roots, stems, and leaves of wheat seedlings in response to exogenous auxin treatment. Moreover, protein network analyses and co-expression results showed that TaTIR1-TaARF15/18/19-TaIAA13 may interact at both the protein and genetic levels. The results of subsequent evolutionary analyses showed that three transcripts of TaARF15 in the A subgenome of wheat exhibited high evolutionary rate and underwent positive selection. Transgenic analyses indicated that TaARF15-A.1 promoted the growth of roots and leaves of Arabidopsis thaliana and was upregulated in the overexpression plants after auxin treatment. Our results will provide reference information for subsequent research and utilization of the TaARF gene family.

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出版当年[2017]版:
大类 | 2 区 生物
小类 | 2 区 植物科学
最新[2023]版:
大类 | 2 区 生物学
小类 | 2 区 植物科学
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出版当年[2016]版:
Q1 PLANT SCIENCES
最新[2023]版:
Q1 PLANT SCIENCES

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第一作者机构: [1]Shanxi Key Laboratory of Crop Genetics and Molecular Improvement, Key Laboratory of Crop Gene Resources and Germplasm Enhancement on Loess Plateau of the Ministry of Agriculture, Institute of Crop Science, Shanxi Academy of Agricultural Sciences, Taiyuan, China,
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通讯作者:
通讯机构: [1]Shanxi Key Laboratory of Crop Genetics and Molecular Improvement, Key Laboratory of Crop Gene Resources and Germplasm Enhancement on Loess Plateau of the Ministry of Agriculture, Institute of Crop Science, Shanxi Academy of Agricultural Sciences, Taiyuan, China,
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